28 lines
944 B
R
28 lines
944 B
R
% Generated by roxygen2: do not edit by hand
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% Please edit documentation in R/mash-evaluation.R
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\name{mash_plot_covar}
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\alias{mash_plot_covar}
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\title{ggplot of covariance matrix masses}
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\usage{
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mash_plot_covar(m, saveoutput = FALSE, suffix = "")
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}
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\arguments{
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\item{m}{An object of type mash}
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\item{saveoutput}{Logical. Should the output be saved to the path?}
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\item{suffix}{Character. Optional. A unique suffix used to save the files,
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instead of the current date & time.}
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}
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\description{
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Creates a bar plot using ggplot of the masses that are on each
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covariance matrix specified in the mash model.
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}
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\note{
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This plot can be useful for seeing the overall patterns of effects in
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the data used in mash. Non-significant effects will add mass to the
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"no_effects" covariance matrix, while significant effects will add mass
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to one of the other covariance matrices. You can use mash_plot_Ulist()
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to plot the covariance matrix patterns themselves.
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}
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