45 lines
1.3 KiB
R
45 lines
1.3 KiB
R
% Generated by roxygen2: do not edit by hand
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% Please edit documentation in R/mash-evaluation.R
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\name{mash_plot_marker_effect}
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\alias{mash_plot_marker_effect}
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\title{ggplot of single mash effect}
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\usage{
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mash_plot_marker_effect(
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m,
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snp = snp,
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n = NA,
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i = NA,
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marker = TRUE,
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saveoutput = FALSE,
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suffix = ""
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)
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}
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\arguments{
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\item{m}{An object of type mash}
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\item{snp}{A bigSNP object, produced by the bigsnpr package. Here,
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the WAMI SNP information.}
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\item{n}{Optional. Integer or integer vector. The result number to plot, in
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order of significance. 1 would be the top result, for example. Find
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these with \code{\link{get_significant_results}}.}
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\item{i}{Optional. Integer or integer vector. The result number to plot, in
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the order of the mash object. 1 would be the first marker in the mash
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object, for example. Find these with \code{\link{get_marker_df}}.}
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\item{marker}{Optional. Print the marker name on the plot?}
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\item{saveoutput}{Logical. Should the output be saved to the path?}
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\item{suffix}{Character. Optional. A unique suffix used to save the files,
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instead of the current date & time.}
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}
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\description{
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Creates a plot with point estimates and standard errors for
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effects of a single SNP in multiple conditions.
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}
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\note{
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Specify only one of n or i.
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}
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