Cleanup file output, add UI verbosity

src/main/java/PlateFileWriter.java

@@ -73,6 +73,7 @@ public class PlateFileWriter {
             }
             rows.add(tmp);
         }
+        //build string of well concentrations
         StringBuilder concen = new StringBuilder();
         for(Integer i: concentrations){
             concen.append(i.toString());
@@ -80,7 +81,9 @@ public class PlateFileWriter {
         }
         String concenString = concen.toString();
 
-        CSVFormat plateFileFormat = CSVFormat.Builder.create().setCommentMarker('#').build();
+        CSVFormat plateFileFormat = CSVFormat.Builder.create()
+                .setCommentMarker('#')
+                .build();
 
         try(BufferedWriter writer = Files.newBufferedWriter(Path.of(filename), StandardOpenOption.CREATE_NEW);
             CSVPrinter printer = new CSVPrinter(writer, plateFileFormat);
@@ -96,7 +99,7 @@ public class PlateFileWriter {
             else {
                 printer.printComment("Std. dev.: " + stdDev);
             }
-            printer.printRecords(wellsAsStrings);
+            printer.printRecords(rows);
         } catch(IOException ex){
             System.out.println("Could not make new file named "+filename);
             System.err.println(ex);