diff --git a/src/main/java/Simulator.java b/src/main/java/Simulator.java index 5e03b57..a24190f 100644 --- a/src/main/java/Simulator.java +++ b/src/main/java/Simulator.java @@ -12,14 +12,6 @@ import java.text.NumberFormat; import java.time.Instant; import java.time.Duration; import java.util.*; -/* - Refactor notes - What would be necessary to do everything with only one scan through the sample plate? - I would need to keep a list of sequences (real and spurious), and metadata about each sequence. - I would need the data: - * # of each well the sequence appears in - * Read count in that well - */ //NOTE: "sequence" in method and variable names refers to a peptide sequence from a simulated T cell