From 3c2ec9002e17cd99d835f8594fac2bcbb63f0518 Mon Sep 17 00:00:00 2001
From: eugenefischer <66030419+eugenefischer@users.noreply.github.com>
Date: Sat, 22 Oct 2022 14:13:31 -0500
Subject: [PATCH] Add field for algorithm type, methods to set algorithm type

---
 src/main/java/BiGpairSEQ.java | 12 +++++++++---
 1 file changed, 9 insertions(+), 3 deletions(-)

diff --git a/src/main/java/BiGpairSEQ.java b/src/main/java/BiGpairSEQ.java
index 6b64f50..8485e0d 100644
--- a/src/main/java/BiGpairSEQ.java
+++ b/src/main/java/BiGpairSEQ.java
@@ -13,6 +13,7 @@ public class BiGpairSEQ {
     private static boolean cacheCells = false;
     private static boolean cachePlate = false;
     private static boolean cacheGraph = false;
+    private static AlgorithmType matchingAlgoritmType = AlgorithmType.HUNGARIAN;
     private static HeapType priorityQueueHeapType = HeapType.FIBONACCI;
     private static boolean outputBinary = true;
     private static boolean outputGraphML = false;
@@ -108,7 +109,6 @@ public class BiGpairSEQ {
         return graphFilename;
     }
 
-
     public static boolean cacheCells() {
         return cacheCells;
     }
@@ -157,10 +157,16 @@ public class BiGpairSEQ {
         BiGpairSEQ.cacheGraph = cacheGraph;
     }
 
-    public static String getPriorityQueueHeapType() {
-        return priorityQueueHeapType.name();
+    public static HeapType getPriorityQueueHeapType() {
+        return priorityQueueHeapType;
     }
 
+    public static AlgorithmType getMatchingAlgoritmType() { return matchingAlgoritmType; }
+
+    public static void setHungarianAlgorithm() { matchingAlgoritmType = AlgorithmType.HUNGARIAN; }
+
+    public static void setAuctionAlgorithm() { matchingAlgoritmType = AlgorithmType.AUCTION; }
+
     public static void setPairingHeap() {
         priorityQueueHeapType = HeapType.PAIRING;
     }