Fix bug in correct match counter
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@@ -236,7 +236,7 @@ public class Simulator implements GraphModificationFunctions {
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//Integer target = graph.getEdgeTarget(e);
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//The match map is all matches found, not just true matches!
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matchMap.put(source.getSequence(), target.getSequence());
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check = target.getOccupancy().equals(distCellsMapAlphaKey.get(source.getSequence()));
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check = target.getSequence().equals(distCellsMapAlphaKey.get(source.getSequence()));
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//check = plateVtoBMap.get(target).equals(distCellsMapAlphaKey.get(plateVtoAMap.get(source)));
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if(check) {
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trueCount++;
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