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add disclosure section

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eugenefischer
2023-01-18 16:28:16 -06:00
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7. CITATIONS
8. ACKNOWLEDGEMENTS
9. AUTHOR
10. DISCLOSURE
## ABOUT
@@ -649,8 +650,18 @@ the file of distinct cells may enable better simulated replication of this exper
* [Apache Commons CLI](https://commons.apache.org/proper/commons-cli/) -- To enable command line arguments for scripting.
## ACKNOWLEDGEMENTS
BiGpairSEQ was conceived in collaboration with Dr. Alice MacQueen, who brought the original
BiGpairSEQ was conceived in collaboration with the author's spouse, Dr. Alice MacQueen, who brought the original
pairSEQ paper to the author's attention and explained all the biology terms he didn't know.
## AUTHOR
BiGpairSEQ algorithm and simulation by Eugene Fischer, 2021. Improvements and documentation, 2022.
BiGpairSEQ algorithm and simulation by Eugene Fischer, 2021. Improvements and documentation, 2022–2023.
## DISCLOSURE
The earliest versions of the BiGpairSEQ simulator were written in 2021 to let Dr. MacQueen test hypothetical extensions
of the published pairSEQ protocol while she was interviewing for a position at Adaptive Biotechnologies. She has been
employed at Adaptive Biotechnologies since 2022.
The author has worked on this BiGpairSEQ simulator since 2021 without Dr. MacQueen's involvement, since she has had
access to related, proprietary technologies. The author has had no such access, relying exclusively on the 2015 pairSEQ
paper and other academic publications. He continues to work on BiGpairSEQ
recreationally, as it involves some very beautiful math.