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Reformat TODO

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efischer
2022-02-24 15:48:10 -06:00
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@@ -254,7 +254,7 @@ slightly less time than the simulation itself. Real elapsed time from start to f
## TODO ## TODO
* ~~Try invoking GC at end of workloads to reduce paging to disk~~ DONE * ~~Try invoking GC at end of workloads to reduce paging to disk~~ DONE
* Hold graph data in memory until another graph is read-in? ~~ABANDONED~~ ~~UNABANDONED~~ DONE * ~~Hold graph data in memory until another graph is read-in? ABANDONED UNABANDONED~~ DONE
* ~~*No, this won't work, because BiGpairSEQ simulations alter the underlying graph based on filtering constraints. Changes would cascade with multiple experiments.*~~ * ~~*No, this won't work, because BiGpairSEQ simulations alter the underlying graph based on filtering constraints. Changes would cascade with multiple experiments.*~~
* Might have figured out a way to do it, by taking edges out and then putting them back into the graph. This may actually be possible. * Might have figured out a way to do it, by taking edges out and then putting them back into the graph. This may actually be possible.
* It is possible, though the modifications to the graph incur their own performance penalties. Need testing to see which option is best. * It is possible, though the modifications to the graph incur their own performance penalties. Need testing to see which option is best.