diff --git a/src/main/java/CommandLineInterface.java b/src/main/java/CommandLineInterface.java index d10fb3d..b0d2a64 100644 --- a/src/main/java/CommandLineInterface.java +++ b/src/main/java/CommandLineInterface.java @@ -62,15 +62,15 @@ public class CommandLineInterface { if (line.hasOption("help")) { HelpFormatter formatter = new HelpFormatter(); - formatter.printHelp("BiGpairSEQ_Sim", mainOptions); + formatter.printHelp("BiGpairSEQ_Sim.jar", mainOptions); System.out.println(); - formatter.printHelp("BiGpairSEQ_SIM -cells", cellOptions); + formatter.printHelp("BiGpairSEQ_Sim.jar -cells", cellOptions); System.out.println(); - formatter.printHelp("BiGpairSEQ_Sim -plate", plateOptions); + formatter.printHelp("BiGpairSEQ_Sim.jar -plate", plateOptions); System.out.println(); - formatter.printHelp("BiGpairSEQ_Sim -graph", graphOptions); + formatter.printHelp("BiGpairSEQ_Sim.jar -graph", graphOptions); System.out.println(); - formatter.printHelp("BiGpairSEQ_Sim -match", matchOptions); + formatter.printHelp("BiGpairSEQ_Sim.jar -match", matchOptions); } else if (line.hasOption("cells")) { line = parser.parse(cellOptions, Arrays.copyOfRange(args, 1, args.length));