eugenefischer
|
593dd6c60f
|
Add sample cell filename, cell sample size, and sample plate size to metadata
|
2022-09-30 02:58:15 -05:00 |
|
eugenefischer
|
b8aeeb988f
|
Add sequence dropout rate to metadata output
|
2022-09-30 00:33:41 -05:00 |
|
eugenefischer
|
89687fa849
|
Add real sequence collision rate, make fields final
|
2022-09-28 17:43:06 -05:00 |
|
eugenefischer
|
810abdb705
|
Add read depth parameters to output metadata
|
2022-09-27 11:13:12 -05:00 |
|
eugenefischer
|
199c81f983
|
Implement read count for vertices
|
2022-09-26 19:42:19 -05:00 |
|
eugenefischer
|
02c8e6aacb
|
Refactor sequences to be strings instead of integers, to make simulating read errors easier
|
2022-09-26 13:37:48 -05:00 |
|
eugenefischer
|
8a77d53f1f
|
Output sequence counts before and after pre-filtering (currently pre-filtering only sequences present in all wells)
|
2022-09-25 17:20:50 -05:00 |
|
eugenefischer
|
73c83bf35d
|
Add comment on map data encodng
|
2022-09-21 21:46:00 -05:00 |
|
eugenefischer
|
29b844afd2
|
by-hand merge of needed code from custom vertex branch
|
2022-09-21 16:48:26 -05:00 |
|
|
|
3ccee9891b
|
change "concentrations" to "populations" for consistency
|
2022-02-23 08:12:48 -06:00 |
|
|
|
d1c37b5ccd
|
Relocate overlap threshold filters
|
2022-02-20 03:05:56 -06:00 |
|
|
|
837ef7bfe4
|
UI cleanup, some code cleanup
|
2022-02-20 01:05:28 -06:00 |
|
|
|
c4633da9eb
|
Correct propogation of peptide counts
|
2022-02-19 22:33:38 -06:00 |
|
|
|
13fb7168bf
|
Refactor to read/write files of graph and map data
|
2022-02-19 21:46:01 -06:00 |
|
|
|
568a6be3c7
|
Refactoring to allow graphs from file
|
2022-02-19 17:23:55 -06:00 |
|
