eugenefischer
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d3066095d9
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add getter/setter for potential
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2022-10-14 17:32:37 -05:00 |
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eugenefischer
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deed98e79d
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Bugfix
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2022-09-28 12:58:14 -05:00 |
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eugenefischer
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1a35600f50
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Add method to get read count from individual wells
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2022-09-28 12:57:45 -05:00 |
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eugenefischer
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610da68262
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Refactor Vertex class to use SequenceRecords
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2022-09-28 00:58:44 -05:00 |
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eugenefischer
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199c81f983
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Implement read count for vertices
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2022-09-26 19:42:19 -05:00 |
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eugenefischer
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02c8e6aacb
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Refactor sequences to be strings instead of integers, to make simulating read errors easier
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2022-09-26 13:37:48 -05:00 |
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eugenefischer
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184278b72e
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Add fields for simulating read depth. Also a priority queue for lookback auctions
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2022-09-26 00:42:55 -05:00 |
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eugenefischer
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475bbf3107
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Sort vertex lists by vertex label before making adjacency matrix
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2022-09-25 15:54:28 -05:00 |
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1ea68045ce
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Refactor cdr3 matching to use new Vertex class
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2022-02-26 09:49:16 -06:00 |
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ab437512e9
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make Vertex serializable
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2022-02-26 07:45:36 -06:00 |
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f032d3e852
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rewrite GraphML importer/exporter
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2022-02-26 07:34:07 -06:00 |
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b604b1d3cd
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Changing graph to use Vertex class
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2022-02-26 06:19:08 -06:00 |
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f385ebc31f
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Update vertex class
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2022-02-24 16:25:01 -06:00 |
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568a6be3c7
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Refactoring to allow graphs from file
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2022-02-19 17:23:55 -06:00 |
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