eugenefischer
|
199c81f983
|
Implement read count for vertices
|
2022-09-26 19:42:19 -05:00 |
|
eugenefischer
|
02c8e6aacb
|
Refactor sequences to be strings instead of integers, to make simulating read errors easier
|
2022-09-26 13:37:48 -05:00 |
|
eugenefischer
|
184278b72e
|
Add fields for simulating read depth. Also a priority queue for lookback auctions
|
2022-09-26 00:42:55 -05:00 |
|
eugenefischer
|
475bbf3107
|
Sort vertex lists by vertex label before making adjacency matrix
|
2022-09-25 15:54:28 -05:00 |
|
|
|
1ea68045ce
|
Refactor cdr3 matching to use new Vertex class
|
2022-02-26 09:49:16 -06:00 |
|
|
|
ab437512e9
|
make Vertex serializable
|
2022-02-26 07:45:36 -06:00 |
|
|
|
f032d3e852
|
rewrite GraphML importer/exporter
|
2022-02-26 07:34:07 -06:00 |
|
|
|
b604b1d3cd
|
Changing graph to use Vertex class
|
2022-02-26 06:19:08 -06:00 |
|
|
|
f385ebc31f
|
Update vertex class
|
2022-02-24 16:25:01 -06:00 |
|
|
|
568a6be3c7
|
Refactoring to allow graphs from file
|
2022-02-19 17:23:55 -06:00 |
|
