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96ba57d653
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Remove singleton sequences from wells in initial filtering
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2022-03-04 16:14:17 -06:00 |
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b602fb02f1
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Remove obsolete comments
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2022-03-02 23:35:24 -06:00 |
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4c872ed48e
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Add optional stdout print flags
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2022-03-01 15:27:04 -06:00 |
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3fc39302c7
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Add detail to error message
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2022-03-01 15:24:14 -06:00 |
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578bdc0fbf
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clarify help menu text
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2022-03-01 15:08:43 -06:00 |
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8275cf7740
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Check for finite pairing error rate
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2022-03-01 09:01:53 -06:00 |
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64209691f0
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Check for finite pairing error rate
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2022-03-01 09:00:58 -06:00 |
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9fb3095f0f
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Clarify help text
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2022-03-01 08:40:34 -06:00 |
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25acf920c2
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Add version information
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2022-03-01 08:34:35 -06:00 |
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e04d2d6777
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Fix typos in help menu
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2022-03-01 08:16:06 -06:00 |
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3e41afaa64
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bugfix
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2022-02-27 19:08:29 -06:00 |
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bc5d67680d
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Add flag to print metadata to stdout
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2022-02-27 17:36:23 -06:00 |
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f2347e8fc2
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check verbose flag
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2022-02-27 17:35:50 -06:00 |
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c8364d8a6e
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check verbose flag
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2022-02-27 17:34:20 -06:00 |
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b1155f8100
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Format -help CLI option
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2022-02-27 16:53:46 -06:00 |
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12b003a69f
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Add -help CLI option
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2022-02-27 16:45:30 -06:00 |
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32c5bcaaff
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Deactivate file I/O announcement for CLI
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2022-02-27 16:16:24 -06:00 |
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2485ac4cf6
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Add getters to MatchingResult
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2022-02-27 16:15:26 -06:00 |
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05556bce0c
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Add units to metadata
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2022-02-27 16:08:59 -06:00 |
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a822f69ea4
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Control verbose output
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2022-02-27 16:07:17 -06:00 |
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3d1f8668ee
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Control verbose output
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2022-02-27 16:03:57 -06:00 |
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40c743308b
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Initialize wells
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2022-02-27 15:54:47 -06:00 |
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5246cc4a0c
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Re-implement command line options
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2022-02-27 15:35:07 -06:00 |
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a5f7c0641d
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Refactor for better encapsulation with CellSamples
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2022-02-27 14:51:53 -06:00 |
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8ebfc1469f
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Refactor plate to fill its own wells in its constructor
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2022-02-27 14:25:53 -06:00 |
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b53f5f1cc0
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Refactor plate to fill its own wells in its constructor
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2022-02-27 14:17:16 -06:00 |
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974d2d650c
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Refactor plate to fill its own wells in its constructor
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2022-02-27 14:17:11 -06:00 |
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8935407ade
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Get rid of GraphML reader, those files are larger than serialized files
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2022-02-26 10:38:10 -06:00 |
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9fcc20343d
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Fix GraphML writer
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2022-02-26 10:36:00 -06:00 |
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e4d094d796
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Adding GraphML output to options menu
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2022-02-24 17:22:07 -06:00 |
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f385ebc31f
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Update vertex class
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2022-02-24 16:25:01 -06:00 |
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8745550e11
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add MWM algorithm type to matching metadata
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2022-02-24 16:24:48 -06:00 |
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41805135b3
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remove unused import
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2022-02-24 16:04:30 -06:00 |
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373a5e02f9
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Refactor to make CellSample class more self-contained
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2022-02-24 16:03:49 -06:00 |
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3d9890e16a
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Change GraphModificationFunctions to only save edges if graph data is cached
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2022-02-24 15:32:27 -06:00 |
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dd64ac2731
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Change GraphModificationFunctions to interface
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2022-02-24 15:18:09 -06:00 |
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a5238624f1
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Change default graph caching behavior to false
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2022-02-24 15:14:28 -06:00 |
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d8ba42b801
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Fix Algorithm Options menu output
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2022-02-24 14:59:08 -06:00 |
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8edd89d784
|
Added heap type selection, fixed error handling
|
2022-02-24 14:48:19 -06:00 |
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108b0ec13f
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Improve options menu wording
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2022-02-24 12:42:09 -06:00 |
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a8b58d3f79
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Output new setting when changing options
|
2022-02-24 12:38:15 -06:00 |
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bf64d57731
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implement option menu for file caching
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2022-02-24 12:30:47 -06:00 |
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c068c3db3c
|
implement option menu for file caching
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2022-02-23 20:35:31 -06:00 |
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17ae763c6c
|
Generate populations correctly
|
2022-02-23 10:37:40 -06:00 |
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decdb147a9
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Cache everything
|
2022-02-23 10:30:42 -06:00 |
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74ffbfd8ac
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make everything use same random number generator
|
2022-02-23 09:29:21 -06:00 |
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08699ce8ce
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Change output order to match interactive UI
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2022-02-23 08:56:09 -06:00 |
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69b0cc535c
|
Error checking
|
2022-02-23 08:55:07 -06:00 |
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e58f7b0a55
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checking for possible divide by zero error.
|
2022-02-23 08:54:14 -06:00 |
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dd2164c250
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implement sample plates with random well populations
|
2022-02-23 08:14:17 -06:00 |
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