Commit Graph

19 Commits

Author SHA1 Message Date
c96b7237e9 Add plate well concentrations to output data 2022-02-20 01:40:01 -06:00
0b28259800 Add plate well concentrations to output data 2022-02-20 01:13:22 -06:00
837ef7bfe4 UI cleanup, some code cleanup 2022-02-20 01:05:28 -06:00
0bebbc7602 Add missing filtering code 2022-02-19 22:56:38 -06:00
84f7ddb696 Fix interactive output 2022-02-19 22:49:50 -06:00
c4633da9eb Correct propogation of peptide counts 2022-02-19 22:33:38 -06:00
5b2ed165d0 Clean up interactive text, bugfix 2022-02-19 22:21:09 -06:00
0026d8cdfe Use buffered input/output streams 2022-02-19 22:04:41 -06:00
13fb7168bf Refactor to read/write files of graph and map data 2022-02-19 21:46:01 -06:00
cfa473c7ce Adding parameters to filter by occupancy difference and percent overlap 2022-02-19 14:06:11 -06:00
ce88e170c1 Update readme with max memory flag 2022-02-18 17:48:25 -06:00
47e23addfa Do new filtering before matching 2022-02-18 17:42:05 -06:00
b9ee31b64c Do new filtering before matching 2022-02-18 17:28:24 -06:00
bf32a55e4b Implement matching using jheaps PairingHeap 2022-02-18 16:09:23 -06:00
acff88475b Command line arguments working, need better documentation and error handling 2021-11-23 12:24:48 -06:00
32593308df Command line arguments for CDR3 matching implemented 2021-11-20 10:43:57 -06:00
09aa5961f3 New executable build after code refactor. 2021-11-18 14:16:42 -06:00
4157cfb556 Usage instructions for executable .jar 2021-11-16 21:27:54 -06:00
cb6330166f Adding executable .jar 2021-11-16 21:21:48 -06:00