efischer 0bebbc7602 Add missing filtering code

2022-02-19 22:56:38 -06:00

..

CellFileReader.java

Recording source file names in output files, allowing output of intermediate results

2021-11-18 15:38:29 -06:00

CellFileWriter.java

Implemented parameter for CDR1 frequency

2021-11-18 11:55:54 -06:00

CellSample.java

Implemented parameter for CDR1 frequency

2021-11-18 11:55:54 -06:00

Equations.java

Command line arguments working, need better documentation and error handling

2021-11-23 12:24:48 -06:00

GraphDataObjectReader.java

Use buffered input/output streams

2022-02-19 22:04:41 -06:00

GraphDataObjectWriter.java

Use buffered input/output streams

2022-02-19 22:04:41 -06:00

GraphMLFileReader.java

Refactor to read/write files of graph and map data

2022-02-19 21:46:01 -06:00

GraphMLFileWriter.java

Refactor to read/write files of graph and map data

2022-02-19 21:46:01 -06:00

GraphWithMapData.java

Correct propogation of peptide counts

2022-02-19 22:33:38 -06:00

MatchingFileWriter.java

First attempt at command line arguments

2021-11-19 17:31:18 -06:00

MatchingResult.java

Recording source file names in output files, allowing output of intermediate results

2021-11-18 15:38:29 -06:00

Plate.java

Implement matching using jheaps PairingHeap

2022-02-18 16:09:23 -06:00

PlateFileReader.java

Recording source file names in output files, allowing output of intermediate results

2021-11-18 15:38:29 -06:00

PlateFileWriter.java

Command line arguments working, need better documentation and error handling

2021-11-23 12:24:48 -06:00

Simulator.java

Add missing filtering code

2022-02-19 22:56:38 -06:00

UserInterface.java

Fix interactive output

2022-02-19 22:49:50 -06:00

Vertex.java

Refactoring to allow graphs from file

2022-02-19 17:23:55 -06:00