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added acknowledgements

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efischer
2021-11-12 11:34:21 -06:00
parent 92add6786a
commit 6606702aa1
2 changed files with 10 additions and 16 deletions
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15
.idea/artifacts/TCellSim_jar2.xml generated
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@@ -1,15 +0,0 @@
<component name="ArtifactManager">
<artifact type="jar" name="TCellSim:jar2">
<output-path>$PROJECT_DIR$/out/artifacts/TCellSim_jar2</output-path>
<root id="archive" name="TCellSim.jar">
<element id="directory" name="META-INF">
<element id="file-copy" path="$PROJECT_DIR$/src/main/java/META-INF/MANIFEST.MF" />
</element>
<element id="module-output" name="TCellSim" />
<element id="extracted-dir" path="$MAVEN_REPOSITORY$/org/apache/commons/commons-csv/1.9.0/commons-csv-1.9.0.jar" path-in-jar="/" />
<element id="extracted-dir" path="$MAVEN_REPOSITORY$/org/jetbrains/annotations/23.0.0/annotations-23.0.0.jar" path-in-jar="/" />
<element id="extracted-dir" path="$MAVEN_REPOSITORY$/org/jgrapht/jgrapht-core/1.5.1/jgrapht-core-1.5.1.jar" path-in-jar="/" />
<element id="extracted-dir" path="$MAVEN_REPOSITORY$/org/jheaps/jheaps/0.13/jheaps-0.13.jar" path-in-jar="/" />
</root>
</artifact>
</component>

11
src/main/java/UserInterface.java
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@@ -25,7 +25,7 @@ public class UserInterface {
case 1 -> makeCells();
case 2 -> makePlate();
case 3 -> matchCells();
//case 4 -> //method call goes here
case 4 -> acknowledge();
case 0 -> quit = true;
default -> throw new InputMismatchException("Invalid input.");
}
@@ -189,4 +189,13 @@ public class UserInterface {
Simulator.matchCells(filename, cells, plate, lowThreshold, highThreshold);
}
}
private static void acknowledge(){
System.out.println("Simulation based on:");
System.out.println("Howie, B., Sherwood, A. M., et. al.");
System.out.println("High-throughput pairing of T cell receptor alpha and beta sequences.");
System.out.println("Sci. Transl. Med. 7, 301ra131 (2015)");
System.out.println("");
System.out.println("Simulation by Eugene Fischer, 2021");
}
}