Commit Graph

189 Commits

Author SHA1 Message Date
eugenefischer
06e72314b0 Reword option menu item 2022-09-21 21:43:47 -05:00
eugenefischer
63317f2aa0 Reword output message 2022-09-21 18:08:52 -05:00
eugenefischer
a054c0c20a update TODO 2022-09-21 16:50:00 -05:00
eugenefischer
29b844afd2 by-hand merge of needed code from custom vertex branch 2022-09-21 16:48:26 -05:00
eugenefischer
3ba305abdb Update ToDo 2022-09-21 13:30:30 -05:00
eugenefischer
3707923398 Merge remote-tracking branch 'origin/master' 2022-09-21 13:16:52 -05:00
eugenefischer
cf771ce574 parameterized sequence indices 2022-09-21 13:15:49 -05:00
f980722b56 update TODO 2022-09-21 18:09:37 +00:00
1df86f01df parameterized sequence indices 2022-03-05 12:03:31 -06:00
96ba57d653 Remove singleton sequences from wells in initial filtering 2022-03-04 16:14:17 -06:00
b602fb02f1 Remove obsolete comments 2022-03-02 23:35:24 -06:00
325e1ebe2b Add data on randomized well population behavior 2022-03-02 23:21:56 -06:00
df047267ee Add data on randomized well population behavior 2022-03-02 22:54:17 -06:00
03e8d31210 Add data on randomized well population behavior 2022-03-02 18:55:19 -06:00
582dc3ef40 Update readme 2022-03-02 12:39:40 -06:00
4c872ed48e Add optional stdout print flags 2022-03-01 15:27:04 -06:00
3fc39302c7 Add detail to error message 2022-03-01 15:24:14 -06:00
578bdc0fbf clarify help menu text 2022-03-01 15:08:43 -06:00
8275cf7740 Check for finite pairing error rate 2022-03-01 09:01:53 -06:00
64209691f0 Check for finite pairing error rate 2022-03-01 09:00:58 -06:00
1886800873 update readme 2022-03-01 08:54:32 -06:00
bedf0894bc update readme 2022-03-01 08:45:40 -06:00
2ac3451842 update readme 2022-03-01 08:43:48 -06:00
67ec3f3764 update readme 2022-03-01 08:43:18 -06:00
b5a8b7e2d5 update readme 2022-03-01 08:41:57 -06:00
9fb3095f0f Clarify help text 2022-03-01 08:40:34 -06:00
25acf920c2 Add version information 2022-03-01 08:34:35 -06:00
f301327693 Update readme with -graphml flag 2022-03-01 08:24:43 -06:00
e04d2d6777 Fix typos in help menu 2022-03-01 08:16:06 -06:00
3e41afaa64 bugfix 2022-02-27 19:08:29 -06:00
bc5d67680d Add flag to print metadata to stdout 2022-02-27 17:36:23 -06:00
f2347e8fc2 check verbose flag 2022-02-27 17:35:50 -06:00
c8364d8a6e check verbose flag 2022-02-27 17:34:20 -06:00
6f5afbc6ec Update readme with CLI arguments v2.0 2022-02-27 17:01:12 -06:00
fb4d22e7a4 Update readme with CLI arguments 2022-02-27 17:00:54 -06:00
e10350c214 Update readme with CLI arguments 2022-02-27 16:56:58 -06:00
b1155f8100 Format -help CLI option 2022-02-27 16:53:46 -06:00
12b003a69f Add -help CLI option 2022-02-27 16:45:30 -06:00
32c5bcaaff Deactivate file I/O announcement for CLI 2022-02-27 16:16:24 -06:00
2485ac4cf6 Add getters to MatchingResult 2022-02-27 16:15:26 -06:00
05556bce0c Add units to metadata 2022-02-27 16:08:59 -06:00
a822f69ea4 Control verbose output 2022-02-27 16:07:17 -06:00
3d1f8668ee Control verbose output 2022-02-27 16:03:57 -06:00
40c743308b Initialize wells 2022-02-27 15:54:47 -06:00
5246cc4a0c Re-implement command line options 2022-02-27 15:35:07 -06:00
a5f7c0641d Refactor for better encapsulation with CellSamples 2022-02-27 14:51:53 -06:00
8ebfc1469f Refactor plate to fill its own wells in its constructor 2022-02-27 14:25:53 -06:00
b53f5f1cc0 Refactor plate to fill its own wells in its constructor 2022-02-27 14:17:16 -06:00
974d2d650c Refactor plate to fill its own wells in its constructor 2022-02-27 14:17:11 -06:00
6b5837e6ce Add Vose's alias method to to-dos 2022-02-27 11:46:11 -06:00