Commit Graph

144 Commits

Author SHA1 Message Date
a5f7c0641d Refactor for better encapsulation with CellSamples 2022-02-27 14:51:53 -06:00
8ebfc1469f Refactor plate to fill its own wells in its constructor 2022-02-27 14:25:53 -06:00
b53f5f1cc0 Refactor plate to fill its own wells in its constructor 2022-02-27 14:17:16 -06:00
974d2d650c Refactor plate to fill its own wells in its constructor 2022-02-27 14:17:11 -06:00
6b5837e6ce Add Vose's alias method to to-dos 2022-02-27 11:46:11 -06:00
b4cc240048 Update Readme v1.5 2022-02-26 11:03:31 -06:00
ff72c9b359 Update Readme 2022-02-26 11:02:23 -06:00
88eb8aca50 Update Readme 2022-02-26 11:01:44 -06:00
98bf452891 Update Readme 2022-02-26 11:01:20 -06:00
c2db4f87c1 Update Readme 2022-02-26 11:00:18 -06:00
8935407ade Get rid of GraphML reader, those files are larger than serialized files 2022-02-26 10:38:10 -06:00
9fcc20343d Fix GraphML writer 2022-02-26 10:36:00 -06:00
e4d094d796 Adding GraphML output to options menu 2022-02-24 17:22:07 -06:00
f385ebc31f Update vertex class 2022-02-24 16:25:01 -06:00
8745550e11 add MWM algorithm type to matching metadata 2022-02-24 16:24:48 -06:00
41805135b3 remove unused import 2022-02-24 16:04:30 -06:00
373a5e02f9 Refactor to make CellSample class more self-contained 2022-02-24 16:03:49 -06:00
7f18311054 fix typos 2022-02-24 15:55:32 -06:00
bcb816c3e6 Reformat TODO 2022-02-24 15:48:10 -06:00
dad0fd35fd Update readme to reflect wells with random population implemented 2022-02-24 15:47:08 -06:00
35d580cfcf Update readme to reflect wells with random population implemented 2022-02-24 15:45:03 -06:00
ab8d98ed81 Update readme to reflect new default caching behavior. v1.4 2022-02-24 15:39:15 -06:00
3d9890e16a Change GraphModificationFunctions to only save edges if graph data is cached 2022-02-24 15:32:27 -06:00
dd64ac2731 Change GraphModificationFunctions to interface 2022-02-24 15:18:09 -06:00
a5238624f1 Change default graph caching behavior to false 2022-02-24 15:14:28 -06:00
d8ba42b801 Fix Algorithm Options menu output 2022-02-24 14:59:08 -06:00
8edd89d784 Added heap type selection, fixed error handling 2022-02-24 14:48:19 -06:00
2829b88689 Update readme to reflect caching changes v1.3 2022-02-24 12:47:26 -06:00
108b0ec13f Improve options menu wording 2022-02-24 12:42:09 -06:00
a8b58d3f79 Output new setting when changing options 2022-02-24 12:38:15 -06:00
bf64d57731 implement option menu for file caching 2022-02-24 12:30:47 -06:00
c068c3db3c implement option menu for file caching 2022-02-23 20:35:31 -06:00
4bcda9b66c update readme v1.2 2022-02-23 13:22:04 -06:00
17ae763c6c Generate populations correctly 2022-02-23 10:37:40 -06:00
decdb147a9 Cache everything 2022-02-23 10:30:42 -06:00
74ffbfd8ac make everything use same random number generator 2022-02-23 09:29:21 -06:00
08699ce8ce Change output order to match interactive UI 2022-02-23 08:56:09 -06:00
69b0cc535c Error checking 2022-02-23 08:55:07 -06:00
e58f7b0a55 checking for possible divide by zero error. 2022-02-23 08:54:14 -06:00
dd2164c250 implement sample plates with random well populations 2022-02-23 08:14:17 -06:00
7323093bdc change "getRandomNumber" to "getRandomInt" for consistency. 2022-02-23 08:13:52 -06:00
f904cf6672 add more data caching code 2022-02-23 08:13:06 -06:00
3ccee9891b change "concentrations" to "populations" for consistency 2022-02-23 08:12:48 -06:00
40c2be1cfb create populations string correctly 2022-02-23 08:11:01 -06:00
4b597c4e5e remove old testing code 2022-02-23 08:10:35 -06:00
b2398531a3 Update readme 2022-02-23 05:11:36 +00:00
8e9a250890 Cache graph data on creation v1.1 2022-02-22 22:23:55 -06:00
e2a996c997 update readme 2022-02-22 22:23:40 -06:00
a5db89cb0b update readme 2022-02-22 22:13:01 -06:00
1630f9ccba Moved I/O alert to file reader 2022-02-22 22:11:50 -06:00