Commit Graph

84 Commits

Author SHA1 Message Date
44784b7976 Remove artifacts from tracking to stop repo bloat. 2022-02-22 16:10:22 -06:00
7c19896dc9 update readme 2022-02-22 16:09:50 -06:00
aec7e3016f Typos in documentation 2022-02-21 11:19:54 -06:00
5c75c1ac09 Update readme.md 2022-02-21 06:53:30 +00:00
cb1f7adece Change "peptide" references in code to "sequence", adding comments 2022-02-21 00:29:34 -06:00
370de79546 Add performance section to readme 2022-02-21 00:02:49 -06:00
a803336f56 Add performance section to readme 2022-02-21 00:01:20 -06:00
94b54b3416 Add performance section to readme 2022-02-20 23:31:25 -06:00
601e141fd0 Update readme 2022-02-20 22:51:49 -06:00
8f9c6b7d33 Update readme TODO 2022-02-20 20:59:05 -06:00
e5ddc73723 Finish reverting back to wells-as-rows 2022-02-20 20:54:44 -06:00
9b18fac74f Invoke garbage collection 2022-02-20 20:47:12 -06:00
63ef6aa7a0 Revert attempt to switch plate output format. It worked, but introduced a bug in graph filtering I don't want to chase down 2022-02-20 20:45:35 -06:00
7558455f39 Correct errors in output and documentation 2022-02-20 20:13:38 -06:00
410f0ae547 Remove testing code, add garbage collection calls 2022-02-20 20:06:45 -06:00
1bc6a11545 Change plate reader/writer to use columns as wells 2022-02-20 19:58:24 -06:00
2b13e10e95 Change plate reader/writer to use columns as wells 2022-02-20 19:48:09 -06:00
4fd5baeb98 Change plate reader/writer to use columns as wells 2022-02-20 19:41:06 -06:00
b2a4e9a42b Change plate reader/writer to use columns as wells 2022-02-20 19:17:56 -06:00
d1bb49b482 Change plate reader/writer to use columns as wells 2022-02-20 19:12:11 -06:00
9adb7dffb8 Change plate reader/writer to use columns as wells 2022-02-20 19:08:04 -06:00
2023bb9d7e Cleanup file output, add UI verbosity 2022-02-20 18:31:31 -06:00
405fbf17ff improve documentation 2022-02-20 17:11:39 -06:00
24519f4a52 improve documentation 2022-02-20 17:04:25 -06:00
2afd01eeef improve documentation 2022-02-20 15:48:11 -06:00
10d0b711bf improve documentation 2022-02-20 15:38:40 -06:00
8f98baf44e improve documentation 2022-02-20 15:37:39 -06:00
d6c7c40c96 improve documentation 2022-02-20 13:23:15 -06:00
61c14b2ecf improve documentation 2022-02-20 13:20:47 -06:00
22fc4aedfe improve documentation 2022-02-20 13:18:49 -06:00
5d24dc6f70 improve documentation 2022-02-20 13:15:32 -06:00
2c01a0211c move readme 2022-02-20 12:02:27 -06:00
f2b5d9e1b7 Rename and update readme 2022-02-20 11:58:12 -06:00
74c8cafd81 scan for filename 2022-02-20 03:08:31 -06:00
d1c37b5ccd Relocate overlap threshold filters 2022-02-20 03:05:56 -06:00
cb2c5a6024 Add plate well concentrations to output data 2022-02-20 02:29:42 -06:00
284a5b3a40 Add plate well concentrations to output data 2022-02-20 02:23:31 -06:00
52afb1edc2 Add plate well concentrations to output data 2022-02-20 02:17:36 -06:00
9c52bc878a Add plate well concentrations to output data 2022-02-20 02:13:13 -06:00
248fe4d662 Add plate well concentrations to output data 2022-02-20 02:09:22 -06:00
5d0e60708c Add plate well concentrations to output data 2022-02-20 01:53:34 -06:00
c96b7237e9 Add plate well concentrations to output data 2022-02-20 01:40:01 -06:00
0b28259800 Add plate well concentrations to output data 2022-02-20 01:13:22 -06:00
837ef7bfe4 UI cleanup, some code cleanup 2022-02-20 01:05:28 -06:00
0bebbc7602 Add missing filtering code 2022-02-19 22:56:38 -06:00
84f7ddb696 Fix interactive output 2022-02-19 22:49:50 -06:00
c4633da9eb Correct propogation of peptide counts 2022-02-19 22:33:38 -06:00
5b2ed165d0 Clean up interactive text, bugfix 2022-02-19 22:21:09 -06:00
0026d8cdfe Use buffered input/output streams 2022-02-19 22:04:41 -06:00
13fb7168bf Refactor to read/write files of graph and map data 2022-02-19 21:46:01 -06:00